PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01307.1.p
Common NameMIMGU_mgv1a017713mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 432aa    MW: 46955.8 Da    PI: 4.8728
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01307.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.86.9e-31208266259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Migut.H01307.1.p 208 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 266
                       699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.81202268IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.4E-31205268IPR003657WRKY domain
SuperFamilySSF1182903.01E-26206268IPR003657WRKY domain
SMARTSM007741.4E-37207267IPR003657WRKY domain
PfamPF031069.0E-26209266IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MCSPLMENYQ GDLADIFRPS TTTATVDGGD PDAAAAALPD WQFPTNPITY SSDPVEDFGD  60
PFNYMGNPLL PAVPGFFSCN NSNIIDGGGG INNSGAGGVN ISHRLLVHDE MRKPSNIFSR  120
MLQISPNAKS PVDHSQAAAA AAASPTAGLR VSPILVSKGC LVESPGGLQI SSPRNTGIKR  180
RKSQAKKVVC IPASSPANSR ATGEIVPSDL WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS  240
ARKQVERSRT DPNMLVITYT SEHNHPWPTQ RNALAGSTRS QPSSKTTTTT TTTTTKKDPT  300
KQINNNNNNN TVIITQQFTT DDVLKEEEEE EEITNNQDFD HQLEMDHKFE LGFQYNPTLL  360
EDDHHNFFAD LGEIEADEPL EDLLFTPGEI NVKDLDFNPF SFYSWSAATT TTAATTASST  420
TASYGEDNKE S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-172062681374WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830494.10.0PREDICTED: probable WRKY transcription factor 35
TrEMBLA0A022RT220.0A0A022RT22_ERYGU; Uncharacterized protein
STRINGPOPTR_0001s46490.11e-112(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67012433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-68WRKY DNA-binding protein 35